|
| Status |
Public on Mar 01, 2010 |
| Title |
EHEC and K-12 E. coli QseD mutant analysis |
| Platform organism |
Escherichia coli |
| Sample organisms |
Escherichia coli; Escherichia coli K-12 |
| Experiment type |
Expression profiling by array
|
| Summary |
We used arrays to examine the overall transcriptional differences between WT K-12 E. coli, and EHEC 86-24 and their corresponding QseD (yjiE) mutants.
|
| |
|
| Overall design |
Strains were grown to OD600 ~1.0, RNA was harvested, cDNA synthesized, fragmented, labeled and hybridized to the chips. Expression of the QseD mutants was compared to the corresponding WT.
|
| |
|
| Contributor(s) |
Habdas BJ, Sperandio V |
| Citation(s) |
20494990 |
| |
| Submission date |
Feb 18, 2010 |
| Last update date |
Mar 08, 2019 |
| Contact name |
Vanessa Sperandio |
| E-mail(s) |
vanessa.sperandio@utsouthwestern.edu
|
| Phone |
214 648 1603
|
| Organization name |
UT Southwestern Medical Center
|
| Street address |
5323 Harry Hines Blvd.
|
| City |
Dallas |
| State/province |
TX |
| ZIP/Postal code |
75390-9048 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL3154 |
[E_coli_2] Affymetrix E. coli Genome 2.0 Array |
|
| Samples (6)
|
|
| Relations |
| BioProject |
PRJNA125435 |
Less...
More...