|
| Status |
Public on Mar 06, 2023 |
| Title |
Neural transcriptomic responses to endotoxin challenge across social treatments |
| Organism |
Taeniopygia guttata |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The aim of this experiment was to test whether the social setting changed neural transcriptomic responses to an endotoxin challenge in zebra finches
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| |
|
| Overall design |
Male zebra finches were given an LPS (L) or control (C) injection and then placed in 4 possible social settings: isolated (ISO), continuously with a known female (KFC), reunited with a known female (KF), and paired with a novel female (NF). Brains from these males were dissected for hypothalamus, bed nucleus of the stria terminalis and nucleus taenea. RNA from each brain region was extracted and transcript levels were obtained using an RNA-seq pipeline.
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| |
|
| Contributor(s) |
Lopes PC |
| Citation(s) |
36878331, 39118023 |
| |
| Submission date |
May 21, 2022 |
| Last update date |
Sep 05, 2024 |
| Contact name |
Patricia C Lopes |
| E-mail(s) |
lopes@chapman.edu
|
| Organization name |
Chapman University
|
| Department |
Biological Sciences
|
| Street address |
450 N Center St
|
| City |
Orange |
| State/province |
CA |
| ZIP/Postal code |
92866 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL27119 |
Illumina NovaSeq 6000 (Taeniopygia guttata) |
|
| Samples (134)
|
|
| Relations |
| BioProject |
PRJNA841225 |
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