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GEO accession:
Series GSE203492
Query DataSets for GSE203492
Status
Public on Feb 21, 2023
Title
H3K36 methylation maintains cell identity by regulating opposing lineage programs
Organism
Mus musculus
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
37460697
Submission date
May 20, 2022
Last update date
Mar 11, 2024
Contact name
Michael Hoetker
E-mail(s)
hoetker@molbio.mgh.harvard.edu
Organization name
Massachusetts General Hospital
Department
Department of Molecular Biology
Lab
Hochedlinger Lab
Street address
Simches Building, Mail code CPZN 4200
City
Boston
State/province
Massachusetts
ZIP/Postal code
02114
Country
USA
Platforms (1)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
Samples (102)
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More...
GSM6167555
RNA WT d8 Repsox replicate 1
GSM6167556
RNA WT d8 Repsox replicate 2
GSM6167557
RNA WT d8 TGFb replicate 1
GSM6167558
RNA WT d8 TGFb replicate 2
GSM6167559
RNA K36M d8 Repsox replicate 1
GSM6167560
RNA K36M d8 Repsox replicate 2
GSM6167561
RNA K36M d8 TGFb replicate 1
GSM6167562
RNA K36M d8 TGFb replicate 2
GSM6168336
RNA WT d0 replicate 1
GSM6168338
RNA WT d0 replicate 2
GSM6168340
RNA WT d2 replicate 1
GSM6168341
RNA WT d2 replicate 2
GSM6168343
RNA WT d4 replicate 1
GSM6168344
RNA WT d4 replicate 2
GSM6168346
RNA WT d6 replicate 1
GSM6168347
RNA WT d6 replicate 2
GSM6168349
RNA WT d8 replicate 1
GSM6168351
RNA WT d8 replicate 2
GSM6168352
RNA WT iPSC replicate 1
GSM6168354
RNA WT iPSC replicate 2
GSM6168355
RNA WT noOKSM replicate 1
GSM6168357
RNA WT noOKSM replicate 2
GSM6168358
RNA K36M d0 replicate 1
GSM6168360
RNA K36M d0 replicate 2
GSM6168362
RNA K36M d2 replicate 1
GSM6168363
RNA K36M d2 replicate 2
GSM6168365
RNA K36M d4 replicate 1
GSM6168366
RNA K36M d4 replicate 2
GSM6168368
RNA K36M d6 replicate 1
GSM6168370
RNA K36M d6 replicate 2
GSM6168371
RNA K36M d8 replicate 1
GSM6168373
RNA K36M d8 replicate 2
GSM6168374
RNA K36M iPSC replicate 1
GSM6168376
RNA K36M iPSC replicate 2
GSM6168377
RNA K36M noOKSM replicate 1
GSM6168379
RNA K36M noOKSM replicate 2
GSM6172219
ATAC WT d0 replicate 1
GSM6172220
ATAC WT d0 replicate 2
GSM6172221
ATAC WT d4 replicate 1
GSM6172222
ATAC WT d4 replicate 2
GSM6172223
ATAC WT iPSC replicate 1
GSM6172224
ATAC WT iPSC replicate 2
GSM6172225
ATAC K36M d0 replicate 1
GSM6172226
ATAC K36M d0 replicate 2
GSM6172227
ATAC K36M d4 replicate 1
GSM6172228
ATAC K36M d4 replicate 2
GSM6172229
ATAC K36M iPSC replicate 1
GSM6172230
ATAC K36M iPSC replicate 2
GSM6173815
CnT WT K27ac replicate 1
GSM6173816
CnT WT K27ac replicate 2
GSM6173817
CnT WT K27me3 replicate 1
GSM6173818
CnT WT K27me3 replicate 2
GSM6173819
CnT WT K36me2 replicate 1
GSM6173820
CnT WT K36me2 replicate 2
GSM6173821
CnT WT K36me3 replicate 1
GSM6173822
CnT WT K36me3 replicate 2
GSM6173823
CnT WT K4me3 replicate 1
GSM6173824
CnT WT K4me3 replicate 2
GSM6173825
CnT WT Sox2 replicate 1
GSM6173826
CnT WT Sox2 replicate 2
GSM6173827
CnT K36M K27ac replicate 1
GSM6173828
CnT K36M K27ac replicate 2
GSM6173829
CnT K36M K27me3 replicate 1
GSM6173830
CnT K36M K27me3 replicate 2
GSM6173831
CnT K36M K36me2 replicate 1
GSM6173832
CnT K36M K36me2 replicate 2
GSM6173833
CnT K36M K36me3 replicate 1
GSM6173834
CnT K36M K36me3 replicate 2
GSM6173835
CnT K36M K4me3 replicate 1
GSM6173836
CnT K36M K4me3 replicate 2
GSM6173837
CnT K36M Sox2 replicate 1
GSM6173838
CnT K36M Sox2 replicate 2
GSM6705992
CnT K36M+DMOG K27ac replicate 1
GSM6705993
CnT K36M+DMOG K27ac replicate 2
GSM6705994
CnT K36M+DMOG K36me3 replicate 1
GSM6705995
CnT K36M+DMOG K36me3 replicate 2
GSM6705996
CnT K36M+DMOG K36me2 replicate 1
GSM6705997
CnT K36M+DMOG K36me2 replicate 2
GSM6705998
CnT K36M+DMOG K27me3 replicate 1
GSM6705999
CnT K36M+DMOG K27me3 replicate 2
GSM6706000
CnT WT Sox2 run 2 replicate 1
GSM6706001
CnT WT Sox2 run 2 replicate 2
GSM6706002
CnT K36M Sox2 run 2 replicate 1
GSM6706003
CnT K36M Sox2 run 2 replicate 2
GSM6706004
CnT K36M+DMOG Sox2 run 2 replicate 1
GSM6706005
CnT K36M+DMOG Sox2 run 2 replicate 2
GSM6706006
CnT WT iPSC K36me3 replicate 1
GSM6706007
CnT WT iPSC K36me3 replicate 2
GSM6706008
CnT WT iPSC K36me2 replicate 1
GSM6706009
CnT WT iPSC K36me2 replicate 2
GSM6706010
CnT WT iPSC K27me3 replicate 1
GSM6706011
CnT WT iPSC K27me3 replicate 2
GSM6706012
CnT WT iPSC K4me3 replicate 1
GSM6706013
CnT WT iPSC K4me3 replicate 2
GSM6706014
CnT K36M iPSC K36me3 replicate 1
GSM6706015
CnT K36M iPSC K36me3 replicate 2
GSM6706016
CnT K36M iPSC K36me2 replicate 1
GSM6706017
CnT K36M iPSC K36me2 replicate 2
GSM6706018
CnT K36M iPSC K27me3 replicate 1
GSM6706019
CnT K36M iPSC K27me3 replicate 2
GSM6706020
CnT K36M iPSC K4me3 replicate 1
GSM6706021
CnT K36M iPSC K4me3 replicate 2
This SuperSeries is composed of the following SubSeries:
Less...
More...
GSE203363
H3K36 methylation maintains cell identity by regulating opposing lineage programs [RNA-seq]
GSE203370
H3K36 methylation maintains cell identity by regulating opposing lineage programs [RNA-seq II]
GSE203452
H3K36 methylation maintains cell identity by regulating opposing lineage programs [ATAC-seq]
GSE203491
H3K36 methylation maintains cell identity by regulating opposing lineage programs [CUT&Tag]
Relations
BioProject
PRJNA840940
Download family
Format
SOFT formatted family file(s)
SOFT
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TXT
Supplementary file
Size
Download
File type/resource
GSE203492_RAW.tar
5.7 Gb
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