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Series GSE203006 Query DataSets for GSE203006
Status Public on Mar 02, 2023
Title CF (1565) vs CFTR-corrected (1564) iPSC_airway at ALI
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Platform: iPSC-derived airway plated on 2D-air liquid interface through basal cell intermediate. Purpose of experiment: To examine the role of mutant CFTR on IPSC-derived airway epithelium (ie. immune dysregulation; dysregulated calcium channel signaling etc). Description of samples:Typical phenotype CF F508del (1565) and syngeneic CFTR-corrected (1564) iPSCs- derived airway epithelium at D90 (D15 CD47hi/CD26lo; replated in 3DMG cultured in 210DCIY x 2 weeks, single-cell passaged and cultured in PNExPlus+dual smad media in 3D, s/p 2 NGFR sorts, cultured at air-liquid interface at 2D)
 
Overall design iPSCs- derived airway epithelium from CF and CFTR-corrected syngeneic line, at D90 (D15 CD47hi/CD26lo; replated in 3DMG cultured in 210DCIY x 2 weeks, single-cell passaged and cultured in PNExPlus+dual smad media in 3D, s/p 2 NGFR sorts, cultured at air-liquid interface at 2D)
 
Contributor(s) Wang R, Wang F, Lindstrom-Vautrin J, Kotton D
Citation(s) 36857488
Submission date May 13, 2022
Last update date Jun 01, 2023
Contact name Feiya Wang
E-mail(s) feiyaw@bu.edu
Organization name Center for Regenerative Medicine, Boston University
Street address 670 Albany street, 2nd floor
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platforms (1)
GPL30173 NextSeq 2000 (Homo sapiens)
Samples (1)
GSM6149672 DK-RW_121719_CF
This SubSeries is part of SuperSeries:
GSE203009 CF vs CFTR-corrected hiPSC-airway at ALI
Relations
BioProject PRJNA838010

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE203006_RAW.tar 31.3 Mb (http)(custom) TAR (of H5)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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