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Series GSE201282 Query DataSets for GSE201282
Status Public on Mar 27, 2024
Title RNA Sequencing Facilitates Quantitative Analysis of Lupus (MRL/lpr) and Control(MRL/mpj)Mouse Microglia Tanscriptomes
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Up to 75% of systematic lupus erythematosus (SLE) patients experience neuropsychiatric (NP) symptoms, called neuropsychiatric SLE (NPSLE), yet the underlying mechanisms remain elusive. Microglia control synaptic pruning during early postnatal brain development. The process in NPSLE remains unclear. Here, we show that microglia-coordinated elimination of synaptic terminals participated in NPSLE in MRL/lpr mice, a lupus-prone murine model. We elucidated that lupus mice developed increased depression- and anxiety-like behaviors and persistent phagocytic microglia reactivation before overt peripheral lupus pathology. Microglial engulfment of synapses explained behavioral disorders. To elucidate the mechanism of synaptic pruning by microglia, we sequenced the gene expression in sorted microglia from both lupus (MRL/lpr) mice and the wild-type (MRL/mpj) controls.
 
Overall design RNA sequencing in microglia from control(MRL/mpj) and lupus (MRL/lpr) mice, in triplicate.
 
Contributor(s) Han X, Sun L
Citation(s) 38494844
Submission date Apr 22, 2022
Last update date Mar 28, 2024
Contact name Han Xiaojuan
E-mail(s) hxj_719@126.com
Phone 15951950715
Organization name Nanjing Drum Tower Hospital, The Affiliated Hospital of Nanjing University Medical School
Street address Zhongshan Road 321
City Nanjing
State/province Jiangsu
ZIP/Postal code 210008
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (6)
GSM6057330 microglia-MRL/lpr1
GSM6057331 microglia-MRL/lpr2
GSM6057332 microglia-MRL/lpr3
Relations
BioProject PRJNA830717

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE201282_RAW.tar 840.0 Kb (http)(custom) TAR (of TXT)
GSE201282_mRNA_Raw_gene_counts_matrix.txt.gz 472.4 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record
Processed data provided as supplementary file

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