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Status |
Public on Jun 16, 2022 |
Title |
Effects of NSUN6 deficiency by systematic transcriptomes and m5C profiles in mice across tissue [RNA-Seq] |
Organism |
Mus musculus |
Experiment type |
Expression profiling by high throughput sequencing
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Summary |
we constructed Nsun6-KO mouse, and observed that the wight and appearance of KO mice didn’t show abnormality. Through Bisulfite sequencing (BS-seq) in wild-type (WT) as well as KO mice and mRNA-seq, we identified high confident Nsun6-dependent m5C sites and performed the transcriptome analysis across five tissues.
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Overall design |
mouse tissue
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Contributor(s) |
Fang L |
Citation(s) |
35743028 |
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Submission date |
Apr 18, 2022 |
Last update date |
Jun 30, 2022 |
Contact name |
Liang Fang |
E-mail(s) |
fangl@sustech.edu.cn
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Organization name |
Southern University of Science and Technology
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Department |
Department of Biology
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Street address |
Shenzhen, Guangdong
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City |
shenzhen |
ZIP/Postal code |
518005 |
Country |
China |
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Platforms (1) |
GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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Samples (20)
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This SubSeries is part of SuperSeries: |
GSE200953 |
Effects of NSUN6 deficiency by systematic transcriptomes and m5C profiles in mice across tissue |
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Relations |
BioProject |
PRJNA827759 |