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| Status |
Public on Nov 24, 2004 |
| Title |
scien-affy-human-87089 |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
Normal kidney, liver, spleen, and Universal RNA from Stratagene were expression profiled across five centers (UCLA, Duke, TGen, Children's National Medical Center in Washington, DC, and University of Pennsylvania) using the Affymetrix, spotted Operon, Agilent, and Amersham arrays to identify differences in expression between microarray platforms as well as centers.
To compare the four microarray platforms as well as the reproducibility across the centers.
There will be expression differences between the five centers.
The following array types were profiled at the centers:
UCLA: Affymetrix, Amersham, Agilent
TGen: Affymetrix (3000 scanner)
Children's: Affymetrix (2500 scanner)
Duke: Operon Oligo
University of Penn.: Affymetrix
Series_author: Consortium,,Cross Platform
Keywords: other
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| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Nov 23, 2004 |
| Last update date |
Aug 10, 2018 |
| Contact name |
Winnie Liang |
| E-mail(s) |
wliang@tgen.org
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| Organization name |
Translational Genomics
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| Street address |
445 N. Fifth Street
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| City |
Phoenix |
| State/province |
AZ |
| ZIP/Postal code |
85012 |
| Country |
USA |
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| Platforms (1) |
| GPL96 |
[HG-U133A] Affymetrix Human Genome U133A Array |
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| Samples (25)
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| GSM35979 |
kidney, entire organ: CNMC Normal Kidney 1_e1_le1 |
| GSM35980 |
kidney, entire organ: CNMC Normal Kidney 2_e1_le1 |
| GSM35981 |
kidney, entire organ: CNMC Normal Kidney 3_e1_le1 |
| GSM35982 |
kidney, entire organ: CNMC Normal Liver 1_e1_le1 |
| GSM35983 |
kidney, entire organ: CNMC Normal Liver 2_e1_le1 |
| GSM35984 |
kidney, entire organ: CNMC Normal Liver 3_e1_le1 |
| GSM35985 |
kidney, entire organ: CNMC Normal Spleen 1_e1_le1 |
| GSM35986 |
kidney, entire organ: CNMC Normal Spleen 2_e1_le1 |
| GSM35987 |
kidney, entire organ: CNMC Normal Spleen 3_e1_le1 |
| GSM35988 |
kidney, entire organ: CNMC Stratagene Universal RNA 1_e1_le1 |
| GSM35989 |
kidney, entire organ: CNMC Stratagene Universal RNA 2_e1_le1 |
| GSM35990 |
kidney, entire organ: CNMC Stratagene Universal RNA 3_e1_le1 |
| GSM35991 |
kidney, entire organ: TGen Normal Kidney 1_e1_le1 |
| GSM35992 |
kidney, entire organ: TGen Normal Kidney 2_e1_le1 |
| GSM35993 |
kidney, entire organ: TGen Normal Kidney 3_e1_le1 |
| GSM35994 |
kidney, entire organ: TGen Normal Liver 1_e1_le1 |
| GSM35995 |
kidney, entire organ: TGen Normal Liver 2_e1_le1 |
| GSM35996 |
kidney, entire organ: TGen Normal Liver 3_e1_le1 |
| GSM35997 |
kidney, entire organ: TGen Normal Spleen 1_e1_le1 |
| GSM35998 |
kidney, entire organ: TGen Normal Spleen 2_e1_le1 |
| GSM35999 |
kidney, entire organ: TGen Normal Spleen 3_e1_le1 |
| GSM36000 |
kidney, entire organ: TGen Stratagene Universal RNA 1_e1_le1 |
| GSM36001 |
kidney, entire organ: TGen Stratagene Universal RNA 2_e1_le1 |
| GSM36002 |
kidney, entire organ: TGen Stratagene Universal RNA 3_e1_le1 |
| GSM36003 |
kidney, entire organ: CNMC Normal Kidney 4_e1_le1 |
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| Relations |
| BioProject |
PRJNA91821 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE2004_RAW.tar |
88.5 Mb |
(http)(custom) |
TAR (of CEL) |
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