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GEO accession:
Series GSE200338
Query DataSets for GSE200338
Status
Public on Jul 25, 2022
Title
Human 5-lipoxygenase regulates transcription by association to euchromatin
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Web link
https://doi.org/10.1016/j.bcp.2022.115187
Citation(s)
35878796
Submission date
Apr 06, 2022
Last update date
Jul 26, 2022
Contact name
Marius Kreiss
E-mail(s)
kreiss@chemie.uni-frankfurt.de
Organization name
Goethe-University
Department
Pharmaceutical Chemistry
Street address
Max-von-Laue-Str. 9
City
Frankfurt am Main
ZIP/Postal code
60438
Country
Germany
Platforms (3)
GPL11154
Illumina HiSeq 2000 (Homo sapiens)
GPL18573
Illumina NextSeq 500 (Homo sapiens)
GPL30173
NextSeq 2000 (Homo sapiens)
Samples (96)
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GSM6031376
ChIP-seq MM6 WT - diff - rep 1
GSM6031377
ChIP-seq MM6 WT - diff - rep 2
GSM6031378
ChIP-seq MM6 WT - diff - rep 3
GSM6031379
ChIP-seq MM6 WT - diff - LPS - rep1
GSM6031380
ChIP-seq MM6 WT - diff - LPS - rep2
GSM6031381
ChIP-seq MM6 WT - diff - LPS - rep3
GSM6031382
ChIP-seq MM6 WT - diff - input - rep 1
GSM6031383
ChIP-seq MM6 WT - diff - input - rep 2
GSM6031384
ChIP-seq MM6 WT - diff - input - rep 3
GSM6031385
ChIP-seq MM6 WT - diff - LPS - input - rep1
GSM6031386
ChIP-seq MM6 WT - diff - LPS - input - rep2
GSM6031387
ChIP-seq MM6 WT - diff - LPS - input - rep3
GSM6031396
FAIRE-seq MM6 WT - diff - rep 1
GSM6031397
FAIRE-seq MM6 WT - diff - rep 2
GSM6031398
FAIRE-seq MM6 WT - diff - rep 3
GSM6031399
FAIRE-seq MM6 WT - diff - LPS - rep1
GSM6031400
FAIRE-seq MM6 WT - diff - LPS - rep2
GSM6031401
FAIRE-seq MM6 WT - diff - LPS - rep3
GSM6031402
FAIRE-seq MM6 5LO-KO - diff - rep 1
GSM6031403
FAIRE-seq MM6 5LO-KO - diff - rep 2
GSM6031404
FAIRE-seq MM6 5LO-KO - diff - rep 3
GSM6031405
FAIRE-seq MM6 5-LO-KO - diff - LPS - rep1
GSM6031406
FAIRE-seq MM6 5-LO-KO - diff - LPS - rep2
GSM6031407
FAIRE-seq MM6 5-LO-KO - diff - LPS - rep3
GSM6031408
FAIRE-seq MM6 WT - diff - input - rep 1
GSM6031409
FAIRE-seq MM6 WT - diff - input - rep 2
GSM6031410
FAIRE-seq MM6 WT - diff - input - rep 3
GSM6031411
FAIRE-seq MM6 WT - diff - LPS - input - rep1
GSM6031412
FAIRE-seq MM6 WT - diff - LPS - input - rep2
GSM6031413
FAIRE-seq MM6 WT - diff - LPS - input - rep3
GSM6031414
FAIRE-seq MM6 5LO-KO - diff - input - rep 1
GSM6031415
FAIRE-seq MM6 5LO-KO - diff - input - rep 2
GSM6031416
FAIRE-seq MM6 5LO-KO - diff - input - rep 3
GSM6031417
FAIRE-seq MM6 5-LO-KO - diff - LPS - input - rep1
GSM6031418
FAIRE-seq MM6 5-LO-KO - diff - LPS - input - rep2
GSM6031419
FAIRE-seq MM6 5-LO-KO - diff - LPS - input - rep3
GSM6031451
RNA-seq MM6 WT - rep 1
GSM6031452
RNA-seq MM6 WT - rep 2
GSM6031453
RNA-seq MM6 WT - rep 3
GSM6031454
RNA-seq MM6 WT - LPS - rep1
GSM6031455
RNA-seq MM6 WT - LPS - rep2
GSM6031456
RNA-seq MM6 WT - LPS - rep3
GSM6031457
RNA-seq MM6 WT - diff - rep 1
GSM6031458
RNA-seq MM6 WT - diff - rep 2
GSM6031459
RNA-seq MM6 WT - diff - rep 3
GSM6031460
RNA-seq MM6 WT - diff - LPS - rep1
GSM6031461
RNA-seq MM6 WT - diff - LPS - rep2
GSM6031462
RNA-seq MM6 WT - diff - LPS - rep3
GSM6031463
RNA-seq MM6 5LO-KO1 - rep 1
GSM6031464
RNA-seq MM6 5LO-KO1 - rep 2
GSM6031465
RNA-seq MM6 5LO-KO1 - rep 3
GSM6031466
RNA-seq MM6 5LO-KO1 - LPS - rep 1
GSM6031467
RNA-seq MM6 5LO-KO1 - LPS - rep 2
GSM6031468
RNA-seq MM6 5LO-KO1 - LPS - rep 3
GSM6031469
RNA-seq MM6 5LO-KO1 - diff - rep 1
GSM6031470
RNA-seq MM6 5LO-KO1 - diff - rep 2
GSM6031471
RNA-seq MM6 5LO-KO1 - diff - rep 3
GSM6031472
RNA-seq MM6 5LO-KO1 - diff - LPS- rep 1
GSM6031473
RNA-seq MM6 5LO-KO1 - diff - LPS- rep 2
GSM6031474
RNA-seq MM6 5LO-KO1 - diff - LPS- rep 3
GSM6031475
RNA-seq MM6 5LO-KO2 - rep 1
GSM6031476
RNA-seq MM6 5LO-KO2 - rep 2
GSM6031477
RNA-seq MM6 5LO-KO2 - rep 3
GSM6031478
RNA-seq MM6 5LO-KO2 - LPS - rep 1
GSM6031479
RNA-seq MM6 5LO-KO2 - LPS - rep 2
GSM6031480
RNA-seq MM6 5LO-KO2 - LPS - rep 3
GSM6031481
RNA-seq MM6 5LO-KO2 - diff - rep 1
GSM6031482
RNA-seq MM6 5LO-KO2 - diff - rep 2
GSM6031483
RNA-seq MM6 5LO-KO2 - diff - rep 3
GSM6031484
RNA-seq MM6 5LO-KO2 - diff - LPS- rep 1
GSM6031485
RNA-seq MM6 5LO-KO2 - diff - LPS- rep 2
GSM6031486
RNA-seq MM6 5LO-KO2 - diff - LPS- rep 3
GSM6031487
RNA-seq MM6 5LO-KI1 - rep 1
GSM6031488
RNA-seq MM6 5LO-KI1 - rep 2
GSM6031489
RNA-seq MM6 5LO-KI1 - rep 3
GSM6031490
RNA-seq MM6 5LO-KI1 - LPS - rep 1
GSM6031491
RNA-seq MM6 5LO-KI1 - LPS - rep 2
GSM6031492
RNA-seq MM6 5LO-KI1 - LPS - rep 3
GSM6031493
RNA-seq MM6 5LO-KI1 - diff - rep 1
GSM6031494
RNA-seq MM6 5LO-KI1 - diff - rep 2
GSM6031495
RNA-seq MM6 5LO-KI1 - diff - rep 3
GSM6031496
RNA-seq MM6 5LO-KI1 - diff - LPS- rep 1
GSM6031497
RNA-seq MM6 5LO-KI1 - diff - LPS- rep 2
GSM6031498
RNA-seq MM6 5LO-KI1 - diff - LPS- rep 3
GSM6031499
RNA-seq MM6 5LO-KI2 - rep 1
GSM6031500
RNA-seq MM6 5LO-KI2 - rep 2
GSM6031501
RNA-seq MM6 5LO-KI2 - rep 3
GSM6031502
RNA-seq MM6 5LO-KI2 - LPS - rep 1
GSM6031503
RNA-seq MM6 5LO-KI2 - LPS - rep 2
GSM6031504
RNA-seq MM6 5LO-KI2 - LPS - rep 3
GSM6031505
RNA-seq MM6 5LO-KI2 - diff - rep 1
GSM6031506
RNA-seq MM6 5LO-KI2 - diff - rep 2
GSM6031507
RNA-seq MM6 5LO-KI2 - diff - rep 3
GSM6031508
RNA-seq MM6 5LO-KI2 - diff - LPS- rep 1
GSM6031509
RNA-seq MM6 5LO-KI2 - diff - LPS- rep 2
GSM6031510
RNA-seq MM6 5LO-KI2 - diff - LPS- rep 3
This SuperSeries is composed of the following SubSeries:
GSE200329
Human 5-lipoxygenase regulates transcription by association to euchromatin [ChIP-seq]
GSE200332
Human 5-lipoxygenase regulates transcription by association to euchromatin [FAIRE-seq]
GSE200336
Human 5-lipoxygenase regulates transcription by association to euchromatin [RNA-seq]
Relations
BioProject
PRJNA824097
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