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Series GSE200321 Query DataSets for GSE200321
Status Public on Apr 27, 2022
Title Epigenome analysis of formalin-fixed paraffin-embedded (FFPE) meningioma samples
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Genome wide DNA methylation profiling of formalin-fixed paraffin-embedded (FFPE) meningioma samples. The Illumina Infinium MethylationEPIC BeadChip was used to obtain DNA methylation profiles across approximately 850,000 methylation sites across the genome at single-nucleotide resolution.
 
Overall design Bisulphite converted DNA from the 64 samples were hybridised to the Illumina Infinium MethylationEPIC Human Methylation Beadchip v1.0.
 
Contributor(s) Chunyu C, Matija S
Citation(s) 35440040
Submission date Apr 06, 2022
Last update date Apr 29, 2022
Contact name Department of Pathology NYU Langone Health
Organization name NYU Langone Health Ambulatory Care Center
Department Department of Pathology
Street address 240 East 38th Street
City New York
State/province NY
ZIP/Postal code 10016
Country USA
 
Platforms (1)
GPL23976 Illumina Infinium HumanMethylation850 BeadChip
Samples (64)
GSM6031128 genomic DNA from meningioma [UT1_RD-19-588]
GSM6031129 genomic DNA from meningioma [UT5_RD-19-592]
GSM6031130 genomic DNA from meningioma [UT9_RD-19-596]
Relations
BioProject PRJNA824053

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE200321_RAW.tar 879.9 Mb (http)(custom) TAR (of IDAT)
GSE200321_non-normalized.txt.gz 212.7 Mb (ftp)(http) TXT
Processed data included within Sample table
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