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Series GSE200266 Query DataSets for GSE200266
Status Public on Oct 23, 2023
Title Notch Signaling in the Thyroid is Essential for Adult Homeostasis (RNAseq BAT)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Notch signaling between neighboring cells vitally contributes to specifying their identity and function, during development and in the adult. Here, we demonstrate that selective blockade of the Notch ligands JAG1 and JAG2 disrupts thermoregulation in adults by decreasing circulating thyroid hormones and thyroid function. Sequencing data in BAT demonstrates that Notch inhibition increases thermoregulation genes and this depends on thyroid hormones.
 
Overall design Male mice of 10-12 weeks were treated with a single intraperitoneal injection of the Notch blocking antibodies (aJ1aJ2: 20mg/kg each; aN1aN2: 5, 10 mg/kg respectively; aN1aN2aN3: 5,10, 20 mg/kg respectively and anti-Ragweed isotype control: 40 mg/kg). Exogenous administration of thyroxine (T4) and 3-Iodotrionine (T3) was performed by intraperitoneal injection of 1ug/g BW of T4 and 0.05?g/g BW T3 diluted in PBS, daily starting at day 2 of the antibody treatment. Tissues were collected and snap frozen at the time of necropsy.
 
Contributor(s) Mosteiro L, Siebel C, Piskol R
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Submission date Apr 06, 2022
Last update date Oct 23, 2023
Contact name Robert Piskol
E-mail(s) piskolr@gene.com
Organization name Genentech Inc.
Department Bioinformatics
Street address 1 DNA Way
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (40)
GSM6025744 BAT RW 15h-1
GSM6025745 BAT RW 15h-2
GSM6025746 BAT RW 15h-3
This SubSeries is part of SuperSeries:
GSE200268 Notch Signaling in the Thyroid is Essential for Adult Homeostasis.
Relations
BioProject PRJNA823911

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE200266_NGS3338_counts.csv.gz 1.4 Mb (ftp)(http) CSV
GSE200266_NGS3338_fpkms.csv.gz 7.3 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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