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| Status |
Public on Dec 21, 2022 |
| Title |
Analysis of total RNA transcriptome in TRIM40 overexpressing HT-29 cells [RNA-seq] |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
To investigate the novel function TRIM40 in intestinal epithelial cells, we established TRIM40 overexpressing HT-29 cells
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| |
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| Overall design |
We then performed gene expression profiling analysis using data obtained from RNA-seq
Comparative gene expression profiling analysis of RNA-seq data for TRIM40 overexpression and control vector expressing HT-29 cells (Mock, Myc-TRIM40).
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| |
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| Contributor(s) |
Kang S |
| Citation(s) |
36755029 |
| |
| Submission date |
Apr 02, 2022 |
| Last update date |
Feb 24, 2023 |
| Contact name |
Sujin Kang |
| E-mail(s) |
sjkang3492@gmail.com
|
| Organization name |
Yonsei University
|
| Department |
Department of Systems Biology
|
| Street address |
50, Yonsei-ro, Seodaemun-gu
|
| City |
Seoul |
| ZIP/Postal code |
03722 |
| Country |
South Korea |
| |
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| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
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| Samples (4)
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| This SubSeries is part of SuperSeries: |
| GSE200024 |
Analysis of TRIM40 induced gene profiles in intestinal cells |
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| Relations |
| BioProject |
PRJNA822641 |
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