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Series GSE199250 Query DataSets for GSE199250
Status Public on Mar 01, 2023
Title Next Generation Sequencing Facilitates Quantitative Analysis of control, SETD6 Knock-out, SETD3 knock-out and SETD6+SETD3 knock-out HeLa cells Transcriptomes
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this study was to identifiy shared target genes for SETD3 and SETD6.
 
Overall design mRNA of HeLa control, SETD6 KO, SETD3 KO and SETD3+SETD6 double KO cells
 
Contributor(s) Admoni-Elisha L, Levy D
Citation(s) 35550916
Submission date Mar 23, 2022
Last update date May 31, 2023
Contact name Dan Levy
E-mail(s) ledan@post.bgu.ac.il
Phone 972-86477251
Organization name Ben-Gurion University
Street address David Ben Gurion Blvd 1
City Be'er Sheva
ZIP/Postal code 8410501
Country Israel
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (8)
GSM5968128 HeLa cells, Control rep1
GSM5968129 HeLa cells, Control rep2
GSM5968130 HeLa cells, SETD6 KO rep1
Relations
BioProject PRJNA819059

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE199250_GeneMat.results.gz 931.1 Kb (ftp)(http) RESULTS
GSE199250_Processed_RLOG_Normalized_counts.txt.gz 1.3 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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