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Series GSE198780 Query DataSets for GSE198780
Status Public on May 19, 2023
Title Tissue-intrinsic beta-catenin signals antagonize Nodal-driven anterior visceral endoderm differentiation
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The anterior-posterior axis of the mammalian embryo is laid down by the anterior visceral endoderm (AVE), an extraembryonic signaling center that is specified within the visceral endoderm. Current models posit that AVE differentiation is promoted globally by epiblast-derived Nodal signals, and spatially restricted by a BMP gradient established by the extraembryonic ectoderm. Here, we report spatially restricted AVE differentiation in bilayered embryo-like aggregates made from mouse embryonic stem cells that lack an extraembryonic ectoderm. Notably, clusters of AVE cells also form in pure visceral endoderm cultures upon activation of Nodal signaling, indicating that tissue-intrinsic factors can restrict AVE differentiation. We identify β-catenin activity as a tissue-intrinsic factor that antagonizes AVE-inducing Nodal signals. Together, our results show how an AVE-like population can arise through interactions between epiblast and visceral endoderm alone. This mechanism may be a flexible solution for axis patterning in a wide range of embryo geometries, and provide robustness to axis patterning when coupled with signal gradients.
 
Overall design We performed single cell RNA sequencing on cells obtained from three types of multicellular aggregates: bilayered embryo-like aggregates (BELAs), VE cysts and Epi cysts.
Web link https://www.nature.com/articles/s41467-024-49380-0
 
Contributor(s) Schumacher S, Fernkorn M, Marten M, Schröter C
Citation(s) 38871742
Submission date Mar 16, 2022
Last update date Jun 14, 2024
Contact name Christian Schröter
E-mail(s) christian.schroeter@mpi-dortmund.mpg.de
Phone +492311332223
Organization name MPI of Molecular Physiology
Department Systemic Cell Biology
Street address Otto-Hahn-Str. 11
City Dortmund
State/province Nordrhein-Westfalen
ZIP/Postal code 44227
Country Germany
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (3)
GSM5956891 BELAs
GSM5956892 Epi cysts
GSM5956893 VE cysts
Relations
BioProject PRJNA816861

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Supplementary file Size Download File type/resource
GSE198780_RAW.tar 78.7 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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