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Series GSE198731 Query DataSets for GSE198731
Status Public on Jul 13, 2022
Title Hippocampal cells multiplex positive and negative engrams
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The hippocampus is involved in processing a variety of mnemonic computations including the spatiotemporal components, as well as the corresponding emotional dimensions, of contextual memory.1-3 Recent studies have demonstrated vast structural and functional heterogeneity along the dorsal-ventral axis1,5 of the hippocampus, and while much is known about how the dorsal hippocampus processes spatial-temporal content, much less is known about whether or not the ventral hippocampus (vHPC) partitions positive and negative experiences into distinct sets of cells.4-9 Here, we combine transgenic and all-virus based activity-dependent tagging strategies to visualize multiple valence-specific engrams in the vHPC and demonstrate two partially segregated cell populations and projections that respond to positive and negative experiences. Next, using an RNA sequencing approach, we find that vHPC positive and negative engram cells display distinct transcriptional programs compared to a neutral engram population. Additionally, while optogenetic manipulation of tagged cell bodies in vHPC is not sufficient to drive preference or avoidance, stimulation of tagged vHPC terminals projecting to the amygdala and nucleus accumbens (NAc), but not the prefrontal cortex (PFC), drives preference and avoidance. These terminals also can undergo a “switch” or “reset” in their capacity to drive either, thereby demonstrating their flexible contributions to behavior. We conclude that the vHPC contains genetically, cellularly, and behaviorally distinct populations of cells processing positive and negative memory engrams. Together, our findings provide a novel means by which to visualize multiple engrams within the same brain and point to their unique genetic signatures as reference maps for the future development of new therapeutic strategies.
 
Overall design The hippocampus contains neurons that correspond to positive and negative engrams, which are segregated by their molecular, cellular, and projection-specific features
 
Contributor(s) Liu S, Yuan B
Citation(s) 36163262, 38990919
Submission date Mar 15, 2022
Last update date Aug 08, 2024
Contact name Shawn Liu
E-mail(s) shawnliu@wi.mit.edu
Organization name Whitehead Institute for Biomedical Research
Lab Rudolf Jaenisch
Street address 455 MAIN STREET
City CAMBRIDGE
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (2)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (10)
GSM5955941 mock_1
GSM5955942 mock_2
GSM5955943 mock_3
Relations
BioProject PRJNA816561

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Supplementary file Size Download File type/resource
GSE198731_RAW.tar 1.8 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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