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Series GSE198695 Query DataSets for GSE198695
Status Public on Mar 18, 2022
Title Regulation of spn by Teg49 in S. aureus
Organism Staphylococcus aureus
Experiment type Expression profiling by high throughput sequencing
Summary We have studied the transcriptome of S. aureus SH1000 strain, isogenic Teg49 mutant strain, and isogenic plasmid complemented strain
 
Overall design 1 growth point, 3 strains, RNA extraction of WT and DTeg49 and complement in SH1000 strains
 
Contributor(s) Liviu C, Adhar M, Cho J, Theprungsirikul J, Sessions K, Rigby W, Ambrose C
Citation(s) 35578788
Submission date Mar 15, 2022
Last update date Jun 21, 2022
Contact name Liviu Cengher
E-mail(s) liviu.cengher.gr@dartmouth.edu
Phone 8583548926
Organization name Geisel School of Medicine
Department Microbiology and Immunology
Lab Cheung
Street address 45 Dewey Field Rd
City Hanover
State/province NH
ZIP/Postal code 03755
Country USA
 
Platforms (1)
GPL24034 Illumina NextSeq 500 (Staphylococcus aureus)
Samples (6)
GSM5955173 WT_3H_R1
GSM5955174 WT_3H_R2
GSM5955175 pEPSA_Teg49_Comp_3H_R1
Relations
BioProject PRJNA816476

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE198695_RAW.tar 690.0 Kb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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