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Series GSE198674 Query DataSets for GSE198674
Status Public on Jan 27, 2023
Title RNA mis-splicing sensitizes SETD2-mutant kidney cancer cells to DNMTi
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by array
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 36662621
Submission date Mar 15, 2022
Last update date Jan 28, 2023
Contact name Hyo Sik Jang
E-mail(s) josh.jang@vai.org
Organization name Van Andel Institute
Street address 333 Bostwick Ave. NE
City Grand Rapids
State/province Michigan
ZIP/Postal code 49503
Country USA
 
Platforms (3)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
GPL21145 Infinium MethylationEPIC
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (132)
GSM5954736 H3K4me3_ChIP_786O_EV_Day0_Rep1
GSM5954737 H3K4me3_ChIP_786O_EV_Day5_Rep1
GSM5954738 H3K4me3_ChIP_786O_EV_Day23_Rep1
This SuperSeries is composed of the following SubSeries:
GSE198670 RNA mis-splicing sensitizes SETD2-mutant kidney cancer cells to DNMTi (ChiP-Seq and RNA-Seq)
GSE198673 RNA mis-splicing sensitizes SETD2-mutant kidney cancer cells to DNMTi (Methylation)
Relations
BioProject PRJNA816424

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE198674_RAW.tar 5.5 Gb (http)(custom) TAR (of BEDGRAPH, BROADPEAK, IDAT, NARROWPEAK)
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