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Series GSE198050 Query DataSets for GSE198050
Status Public on Mar 09, 2022
Title Transcriptome (RNA-Seq) of HEK293T and HEK293TΔALKBH5ΔFTO cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We present RNA-Seq data obtained from HEK293T cells and HEK293T cells with ALKBH5 and FTO demethylases double knockout (HEK293TΔALKBH5ΔFTO), showing m6A-dependent transcriptome alterations.
 
Overall design The RNA-Seq libraries were constructed from cytoplasmic RNA w/o polyA-selection. Three independent biological replicates were made for HEK293T and double knockout cells.
 
Contributor(s) Smolin E, Buyan A, Lyabin DN, Kulakovskiy IV, Eliseeva IA
Citation(s) 35516002
Submission date Mar 07, 2022
Last update date May 10, 2022
Contact name Ivan V Kulakovskiy
Organization name Institute of Protein Research
Street address Institutskaya 4
City Pushchino
ZIP/Postal code 142290
Country Russia
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (6)
GSM5936927 RNA-Seq_wt_rep1
GSM5936928 RNA-Seq_wt_rep2
GSM5936929 RNA-Seq_wt_rep3
Relations
BioProject PRJNA813529

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE198050_HEK293T_dALKBH5dFTO_genecounts.tsv.gz 476.0 Kb (ftp)(http) TSV
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Raw data are available in SRA
Processed data are available on Series record

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