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Series GSE197828 Query DataSets for GSE197828
Status Public on Sep 28, 2022
Title scRNA-seq analysis of murine periodontal ligament
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Periodontal tissue supports teeth in the alveolar bone socket via fibrous attachment of the periodontal ligament (PDL). The PDL contains many stromal cell types, including osteoblasts, cementoblasts, periodontal fibroblasts, and stem/progenitor cells. However, the characteristics and lineage hierarchy of each cell type remain poorly defined. Here we present a single-cell atlas of PDL, highlighting diverse cell populations in PDL.
 
Overall design scRNA-seq experiment was performed using freshly isolated cells from the murine periodontal ligament
 
Contributor(s) Shimbo T, Iwayama T
Citation(s) 36245218
Submission date Mar 03, 2022
Last update date Jan 09, 2023
Contact name Takashi Shimbo
E-mail(s) shimbot@sts.med.osaka-u.ac.jp
Organization name Osaka university
Street address 2-2 Yamadaoka
City Suita
State/province Osaka
ZIP/Postal code 5650871
Country Japan
 
Platforms (1)
GPL30172 NextSeq 2000 (Mus musculus)
Samples (20)
GSM5930980 Periodontal ligament cells - batch 1 rep1
GSM5930981 Periodontal ligament cells - batch 1 rep2
GSM5930982 Periodontal ligament cells - batch 1 rep3
Relations
BioProject PRJNA812401

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE197828_RAW.tar 34.3 Mb (http)(custom) TAR (of TAR)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
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