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| Status |
Public on Apr 18, 2022 |
| Title |
Comparative gene and lncRNA expression profiling in patients with severe community acquired pneumonia and healthy controls. |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
Investigate the transcriptomic differences between patient with severe community acquired pneumonia (SCAP) and healthy control.
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| Overall design |
Whole blood samples were from patients, diagnosed with SCAP according to the IDSA/ATS2007 guidelines and healthy people. Total RNA was extracted from white blood cells that are isolated from the whole blood. Then, rRNA was removed from total RNA to generate strand-specific libraries. The library were sequenced on a Novaseq 6000 platform and 150 bp strand-specific paired-end reads were generated.
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| Contributor(s) |
Zhang Y, Li Y, Sun N, Xu J, Jiang C |
| Citation(s) |
36466920 |
| |
| Submission date |
Feb 09, 2022 |
| Last update date |
Dec 15, 2022 |
| Contact name |
Yiming Zhang |
| E-mail(s) |
papaxz5231@gmail.com
|
| Organization name |
Chinese Academy of Medical Sciences & Peking Union Medical College
|
| Street address |
No.9 Dongdan Santiao
|
| City |
Beijing |
| ZIP/Postal code |
100730 |
| Country |
China |
| |
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| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
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| Samples (77)
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| Relations |
| BioProject |
PRJNA804709 |
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