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Series GSE196084 Query DataSets for GSE196084
Status Public on Sep 14, 2022
Title Transcriptomic Analysis of Naïve mESC, Primed mESC and EpiLC
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Pluripotency is a transient feature during early embryonic development, which enables the epiblast cells to generate all the somatic lineages of the organism. Studies using mouse embryo and embryonic stem cell (ESC) indicates that embryonic pluripotency is highly dynamic with a spectrum of pluripotent states. To better understand and characterise the different pluripotent states (Naïve, Primed and EpiLC), we have generated RNA-seq datasets.
 
Overall design Transcriptome profiling of Naïve mESC, Primed mESC and EpiLC using RNA sequencing
 
Contributor(s) von Meyenn F, Ghosh A
Citation(s) 36192798
Submission date Feb 03, 2022
Last update date Oct 27, 2022
Contact name Ferdinand von Meyenn
E-mail(s) ferdinand.vonmeyenn@hest.ethz.ch
Organization name ETH Zurich
Department Health Sciences and Technology
Lab Nutrition and Metabolic Epigenetics
Street address Schorenstrasse 16
City Schwerzenbach
State/province Zurich
ZIP/Postal code 8603
Country Switzerland
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (9)
GSM5859155 E14_2iLIF_LT_1
GSM5859156 E14_2iLIF_LT_2
GSM5859157 E14_2iLIF_LT_3
Relations
BioProject PRJNA803231

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE196084_E14_rawCounts.txt.gz 440.4 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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