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Series GSE195772 Query DataSets for GSE195772
Status Public on Apr 27, 2022
Title Phenotype of Mrps5-associated polymorphisms is intimately linked to mitoribosomal misreading
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Recently, we have identified a point mutation V338Y in mammalian nuclear-encoded mitochondrial protein MrpS5 that confers error-prone mitochondrial protein synthesis. In-vivo, mutation V338Y was associated with a distinct phenotype including impaired mitochondrial function, enhanced susceptibility to noise-induced hearing damage, anxiety-related behavioral alterations, and age-associated metabolic changes in muscle. To challenge the link between V338Y-mediated misreading and in-vivo phenotype, we introduced mutation G315R into the MRPS5 gene; MRPS5 G315R is homologous to the established bacterial ram mutation uS5 G104R. In contrast to the phylogenetically closely related bacterial translation, the corresponding MRPS5 G315R mutation did not affect the accuracy of mitochondrial protein synthesis. In addition, in the absence of mitochondrial misreading, homozygous mutant MRPS5G315R/G315R mice did not show phenotype distinct from wild-type animals.
 
Overall design Transcriptomic profile of total RNA extracted from HEK cells stably transfected with MRPS5 WT or mutant
 
Contributor(s) Böttger EC, Shcherbakov D, Akbergenov R
Citation(s) 35457201
Submission date Jan 31, 2022
Last update date Apr 29, 2022
Contact name Genome Informatics
E-mail(s) fgcz.gi@gmail.com
Organization name ETH ZURICH / University of Zurich
Department Functional Genomics Center Zurich (FGCZ)
Street address Winterthurerstrasse 190
City Zurich
ZIP/Postal code 8057
Country Switzerland
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (22)
GSM5849935 EBO1_4_WT_233
GSM5849936 EBO1_4_WT-235
GSM5849937 EBO1_4_WT-236
Relations
BioProject PRJNA802128

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE195772_RAW.tar 2.3 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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