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Series GSE194086 Query DataSets for GSE194086
Status Public on Sep 01, 2022
Title Menopausal Transition: Prospective Study of Estrogen Status, Circulating MicroRNAs, and Biomarkers of Bone Metabolism
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We carried out Massive Parallel Sequencing (MPS) to reveal circulating miRNA profiles of 44 patients before and after oophorectomy, as well as in oophorectomized women on estrogen therapy. The sequencing platform identified 1305 miRNA species, out of which 439 miRNAs were present with the base mean, computed by DESeq2, more than 10. We identified 17 miRNAs, which were different in sera with sufficient and low estrogen levels.
 
Overall design miRNA profiling of 44 sera from women before and after oophorectomy, as well as in oophorectomized.
 
Contributor(s) Baloun J, Stepan JJ
Citation(s) 35634507
Submission date Jan 20, 2022
Last update date Dec 01, 2022
Contact name Jiri Baloun
E-mail(s) jubarowe@gmail.com
Organization name Institute of Rheumatology
Department Department of experimental rheumatology
Street address Na Slupi 450/4
City Prague
ZIP/Postal code 12800
Country Czech Republic
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (44)
GSM5827454 s01
GSM5827455 s19
GSM5827456 s21
Relations
BioProject PRJNA799016

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE194086_normalized_read_count.txt.gz 116.0 Kb (ftp)(http) TXT
GSE194086_raw_read_count.txt.gz 46.3 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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