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Series GSE193333 Query DataSets for GSE193333
Status Public on Oct 19, 2022
Title HMGNs Regulate White Adipocyte Browning By Stabilizing Cell Identity [ChIP-Seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We report H3K27ac ChIP seq during time course of white preadipocyte browning from WT and HMGN1 and HMGN2 double knockout (DKO) mice .
 
Overall design H3K27ac ChIP sequencing was performed on white preadipocytes (Day 0), differentiating preadipocytes (day 3 and day 6) and brown-like adipocytes (day 9) from WT and HMGN1 and HMGN2 double knockout (DKO) mice with three replicates in each group.
 
Contributor(s) Nanduri R, Furusawa T, Lobanov A, He B, Xie C, Dadkhah K, Kelly MC, Gavrilova O, Gonzalez FJ, Bustin M
Citation(s) 36435799
Submission date Jan 09, 2022
Last update date Jan 20, 2023
Contact name Michael Bustin
E-mail(s) bustinm@mail.nih.gov
Organization name NIH
Department NCI
Lab Laboratory of Metabolism
Street address Building 37, Room 3122
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (40)
GSM5792345 Preadipocytes H3K27ac ChIP seq WT1
GSM5792346 Preadipocytes H3K27ac ChIP seq WT2
GSM5792347 Preadipocytes H3K27ac ChIP seq WT3
This SubSeries is part of SuperSeries:
GSE193463 HMGNs Regulate White Adipocyte Browning By Stabilizing Cell Identity
Relations
BioProject PRJNA795809

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Supplementary file Size Download File type/resource
GSE193333_RAW.tar 49.5 Mb (http)(custom) TAR (of NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
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