|
| Status |
Public on Dec 21, 2021 |
| Title |
Transcriptome analysis of spinal cord microglia and total spinal cord |
| Organism |
Rattus norvegicus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Transcriptome analysis of spinal cord microglia and total spinal cord from Lewis rats intratracheally treated with PBS, neomycin or vancomycin.
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| |
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| Overall design |
In order to investigate the effect of antibiotics on the CNS, we performed a RNA-Seq analysis on spinal cord-derived microglia and total spinal cord from wild type LEW/Crl rats (Rattus norvegicus) after 7 days of intratracheal treatment with PBS, neomycin (NEO) or vancomycin (VANCO).
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| |
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| Contributor(s) |
Orr S, Hosang L, Odoardi F |
| Citation(s) |
35197636 |
| |
| Submission date |
Dec 21, 2021 |
| Last update date |
Mar 17, 2022 |
| Contact name |
Gabriela Salinas |
| E-mail(s) |
Gabriela.Salinas-Riester@medizin.uni-goettingen.de
|
| Organization name |
Universitaetsmedizin Goettingen
|
| Department |
Department of Pathology
|
| Lab |
NGS Integrative Genomics
|
| Street address |
Kreuzbergring 57
|
| City |
Goettingen |
| State/province |
Lower-Saxony |
| ZIP/Postal code |
37075 |
| Country |
Germany |
| |
|
| Platforms (1) |
| GPL22396 |
Illumina HiSeq 4000 (Rattus norvegicus) |
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| Samples (21)
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| This SubSeries is part of SuperSeries: |
| GSE192415 |
Transcriptome analysis of lung-derived MBP-specific T cells, spinal cord microglia and total spinal cord following antibiotic treatment of the lung |
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| Relations |
| BioProject |
PRJNA791374 |
| SRA |
SRP351967 |
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