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Series GSE191330 Query DataSets for GSE191330
Status Public on Jun 01, 2023
Title RNA-seq profiling of tissue from hybrid deer mouse embryo tails
Organism Peromyscus maniculatus nubiterrae x Peromyscus maniculatus bairdii
Experiment type Expression profiling by high throughput sequencing
Summary We used RNA-seq to estimate allelic expression bias in the embryonic tails of E12.5 and E14.5 Peromyscus maniculatus nubiterrae x bairdii. Samples are from F1 hybrids between forest (P.m.nubiterrae) and prairie (P.m.bairdii) with different numbers of caudal vertebrae.
 
Overall design Embryonic tail RNA expression profiles from E12.5 (n = 4) and E14.5 (n = 4) P. m. nubiterrae x bairdii hybrids
 
Contributor(s) Kingsley EP
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Submission date Dec 20, 2021
Last update date Jun 03, 2023
Contact name Evan Kingsley
E-mail(s) evan_kingsley@hms.harvard.edu
Organization name Harvard Medical School
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL31121 Illumina NovaSeq 6000 (Peromyscus maniculatus nubiterrae x Peromyscus maniculatus bairdii)
Samples (8)
GSM5743928 F1_nXb E12.5 01
GSM5743929 F1_nXb E12.5 11
GSM5743930 F1_nXb E14.5 13
Relations
BioProject PRJNA798072

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE191330_F1Hybrid.personalized.transcripts.fa.gz 42.4 Mb (ftp)(http) FA
GSE191330_RAW.tar 16.9 Mb (http)(custom) TAR (of RESULTS)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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