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Series GSE191167 Query DataSets for GSE191167
Status Public on Jan 31, 2022
Title Trained ILC3 Responses Promote Intestinal Defense
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Group 3 innate lymphoid cells (ILC3) are innate immune effectors that contribute to host defense. Whether ILC3 functions are stably modified following pathogen encounter is unknown. Here we assess the impact of a time-restricted enterobacterial challenge to long-term ILC3 activation. We found that intestinal ILC3 persist for months in an activated state following exposure to Citrobacter rodentium. Upon rechallenge, these “trained” ILC3 proliferate, display enhanced interleukin (IL)-22 responses, and have a superior cell-intrinsic capacity to control infection compared to naïve ILC3. Metabolic changes occur in C. rodentium-exposed ILC3 but only trained ILC3 have enhanced proliferative capacity that contributes to elevated IL-22 production. Accordingly, a limited encounter with a pathogen can promote durable phenotypic and functional changes in intestinal ILC3 that contribute to long-term mucosal defense.
 
Overall design 24 samples from murine small intestine
 
Contributor(s) Serafini N, Jarade A, Surace L, Goncalves P, Sismeiro O, Varet H, Legendre R, Coppée J, Disson O, Durum SK, Frankel G, Di Santo J
Citation(s) 35201883
Submission date Dec 17, 2021
Last update date Mar 01, 2022
Contact name Rachel Legendre
E-mail(s) rachel.legendre@pasteur.fr
Organization name Institut Pasteur
Department Research and Resource Center for Scientific Informatics
Lab Hub of Bioinformatics and Biostatistics
Street address 28, rue du docteur Roux
City Paris
ZIP/Postal code 75724
Country France
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (24)
GSM5740305 CCR6+ ILC3 - Control #1
GSM5740306 CCR6+ ILC3 - Control #2
GSM5740307 CCR6+ ILC3 - Control #3
Relations
BioProject PRJNA789910

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Supplementary file Size Download File type/resource
GSE191167_complete.DEanalysis.txt.gz 6.0 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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