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Series GSE190349 Query DataSets for GSE190349
Status Public on Nov 29, 2022
Title RNAseq of CD4 T cells from female Rheumatoid arthritis patients
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary RNAseq of CD4 cells from 24 female RA patients activated with aCD3 for 48 hours. Patients were collected crossectionally from the Rheumatology clinic during 2018. Age md 47, range 24-67 years, Disease duration md 5.5, range 1-30 years.
 
Overall design 24 women with rheumatoid arthritis, CD4 cells from human PBMC isolated by positive selection on Dynabeads (cat.11331D), stimulated with anti-CD3 (OKT3, Sigma-Aldrich) for 48h
 
Contributor(s) Bokarewa MI, Andersson KM, Erlandsson MC, Oparina N
Citation(s) 36425763
Submission date Dec 07, 2021
Last update date Nov 29, 2022
Contact name Maria I Bokarewa
E-mail(s) maria.bokarewa@rheuma.gu.se
Organization name Gothenburg University
Department Rheumatology and Inflammation Research
Lab Bokarewa
Street address Guldhedagatan 10A
City Gothenburg
State/province VG
ZIP/Postal code SE41346
Country Sweden
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (24)
GSM5720130 RA patient 01_CD4
GSM5720131 RA patient 02_CD4
GSM5720132 RA patient 03_CD4
This SubSeries is part of SuperSeries:
GSE190356 CD4 T cells
Relations
BioProject PRJNA786832
SRA SRP349615

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE190349_RNAseq_RA_patients_CD4_ds1_.xlsx 6.4 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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