|
| Status |
Public on Mar 31, 2022 |
| Title |
H3K9 trimethylation in active compartments optimizes stimulus-regulated transcription by restricting usage of CTCF sites in SINE-B2 repeats |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
35361678 |
| |
| Submission date |
Dec 02, 2021 |
| Last update date |
May 27, 2022 |
| Contact name |
Francesco Gualdrini |
| E-mail(s) |
Francesco.gualdrini@ieo.it
|
| Organization name |
European Institute of Oncology
|
| Department |
Department of Experimental Oncology
|
| Lab |
Transcriptional Control in Inflammation and Cancer
|
| Street address |
Via Adamello, 16
|
| City |
Milan |
| ZIP/Postal code |
20139 |
| Country |
Italy |
| |
|
| Platforms (2) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
|
| Samples (80)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE189970 |
H3K9 trimethylation in active compartments optimizes stimulus-regulated transcription by restricting usage of CTCF sites in SINE-B2 repeats [ATAC-Seq] |
| GSE189971 |
H3K9 trimethylation in active compartments optimizes stimulus-regulated transcription by restricting usage of CTCF sites in SINE-B2 repeats [ChIP-Seq] |
| GSE189973 |
H3K9 trimethylation in active compartments optimizes stimulus-regulated transcription by restricting usage of CTCF sites in SINE-B2 repeats [HiC] |
| GSE189974 |
H3K9 trimethylation in active compartments optimizes stimulus-regulated transcription by restricting usage of CTCF sites in SINE-B2 repeats [RNA-Seq] |
|
| Relations |
| BioProject |
PRJNA785450 |
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