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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Feb 14, 2022 |
| Title |
Single cell characterization of the cellular landscape of acral melanoma identifies novel targets for immunotherapy |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Acral melanoma is a rare subtype of melanoma that arises on the non-hair-bearing skin of the palms, soles and nail beds. In this study, we used single cell RNA-seq (scRNA-seq) to map the transcriptional landscape of acral melanoma and identify novel immunotherapeutic targets.
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| Overall design |
Single cell rnaseq of immune microenvironment of acral melanoma
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| Contributor(s) |
Li J, Smalley I, Chen Z, Wu J, Phadke MS, Chen YA, Smalley K |
| Citation(s) |
35247927 |
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| Submission date |
Nov 30, 2021 |
| Last update date |
May 16, 2022 |
| Contact name |
Keiran Smalley |
| E-mail(s) |
keiran.smalley@moffitt.org
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| Organization name |
Moffitt Cancer Center
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| Street address |
12902 Magnolia Dr
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| City |
Tampa |
| State/province |
FL |
| ZIP/Postal code |
33612 |
| Country |
USA |
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| Platforms (1) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
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| Samples (9)
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| Relations |
| BioProject |
PRJNA784961 |
| SRA |
SRP348670 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE189889_acral_2101.debatched.iscva.h5 |
227.3 Mb |
(ftp)(http) |
H5 |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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