|
| Status |
Public on Nov 30, 2021 |
| Title |
RNA sequencing of Frischella perrara |
| Organism |
Frischella perrara |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNA sequencing of Frischella perrara PEB0191 during in vitro growth and gut colonization
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| |
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| Overall design |
In vitro experiment: RNA sequencing of Frischella perrara PEB0191 wild type and ihfA* mutant after 16h of growth on modified TYG agar. In vivo experiment: RNA sequencing of Frischella perrara PEB0191 during gut colonization. Sampling after 5 days and 10 days post-inoculation. RNA sequencing of Frischella perrara PEB0191 after 16h of growth on modified TYG agar was used as reference condition.
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| |
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| Contributor(s) |
Engel P, Schmidt K |
| Citation missing |
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| |
| Submission date |
Nov 28, 2021 |
| Last update date |
Dec 02, 2021 |
| Contact name |
Philipp Engel |
| E-mail(s) |
philipp.engel@unil.ch
|
| Organization name |
University of Lausanne
|
| Department |
Department of Fundamental Microbiology
|
| Lab |
https://engelbeelab.com/
|
| Street address |
Biophore Building
|
| City |
Lausanne |
| ZIP/Postal code |
1015 |
| Country |
Switzerland |
| |
|
| Platforms (2) |
| GPL31005 |
Illumina HiSeq 2500 (Frischella perrara) |
| GPL31006 |
Illumina MiniSeq (Frischella perrara) |
|
| Samples (18)
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|
| Relations |
| BioProject |
PRJNA784285 |
| SRA |
SRP348273 |
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