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Series GSE188922 Query DataSets for GSE188922
Status Public on Jun 01, 2022
Title Transcriptomic Analysis of Trigeminal Ganglia and Spinal Trigeminal Nucleus Caudalis in Mice with Chronic Inflammatory Temporomandibular Joint Pain
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Purpose: In this study, we aimed to analyze lncRNA expression in the whole transcriptome of trigeminal ganglia (TG) and spinal trigeminal nucleus caudalis (Sp5C) in a chronic inflammatory TMJ pain mouse model. Chronic inflammatory TMJ pain was induced by intra-TMJ injection of complete Freund's adjuvant (CFA). The lncRNA expression patterns in the whole transcriptome of TG and Sp5C were profiled with RNA sequencing.
 
Overall design long non-coding RNA profiles of trigeminal ganglia (TG) and spinal trigeminal nucleus caudalis (Sp5C) of 56-day old wild type (WT) mice were generated by deep sequencing, in triplicate, using Illumina GAIIx.
 
Contributor(s) Bai Q, Dong T
Citation(s) 35633917
Submission date Nov 16, 2021
Last update date Jun 01, 2022
Contact name Qian Bai
E-mail(s) baiqian@zzu.edu.cn
Phone 18638660393
Organization name The second affiliated hospital of Zhengzhou University
Street address JING BA ROAD
City Zhengzhou
ZIP/Postal code 450000
Country China
 
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (12)
GSM5691962 STG1
GSM5691963 STG2
GSM5691964 STG3
Relations
BioProject PRJNA780783
SRA SRP346328

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE188922_Annotated_lncRNA_FPKM.txt.gz 170.7 Kb (ftp)(http) TXT
GSE188922_Novel_lncRNA_FPKM.txt.gz 190.3 Kb (ftp)(http) TXT
GSE188922_mRNA_FPKM.txt.gz 2.7 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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