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| Status |
Public on Aug 22, 2022 |
| Title |
Mapping MYC binding sites in ONS76 medulloblastoma cells |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
In this experiment, we identify MYC binding sites in the medulloblastoma cell line ONS76. The purpose of this experiment was to identify genes bound by MYC and compare MYC bound genes to genes differentially expressed when SOX2 or omomyc were elevated in ONS76 cells.
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| |
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| Overall design |
The medulloblastoma cell line ONS76 was used for ChIP-seq of MYC.
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| |
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| Contributor(s) |
Tansey W, Rizzino A, Popay T, Wang J, Liu Q |
| Citation(s) |
35454854 |
| |
| Submission date |
Oct 29, 2021 |
| Last update date |
Aug 25, 2022 |
| Contact name |
Jing Wang |
| Organization name |
Vanderbilt University Medical Center
|
| Street address |
2220 Pierce Avenue
|
| City |
Nashville |
| State/province |
TN |
| ZIP/Postal code |
37232 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (6)
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| Relations |
| BioProject |
PRJNA776259 |
| SRA |
SRP343763 |
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