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Series GSE185023 Query DataSets for GSE185023
Status Public on Nov 08, 2021
Title In vitro and in vivo transcriptome analysis of CT-26 and Colon 26 tumor models
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To determine the transcriptomic differences between CT-26 and Colon 26, we sequenced RNA from these cell lines as well as tumors isolated ex vivo from tumor bearing animals at sizes 100, 400 and 800 mm3
 
Overall design We sequences RNA from in vitro culturing CT-26 and Colon 26 as well as tumors isolated from CT-26 and Colon 26 tumor bearing mice at sizes 100, 400 and 800 mm3
 
Contributor(s) Sato Y, Fu Y, Liu H, Lee MY, Shaw MH
Citation(s) 34774008
Submission date Sep 29, 2021
Last update date Nov 30, 2021
Contact name Min Young Lee
E-mail(s) min-young.lee@takeda.com
Organization name Takeda Pharmaceutical Company Limited
Street address 40 Landsdowne St
City Cambridge
State/province MA
ZIP/Postal code 02139
Country USA
 
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (30)
GSM5603510 CT26_A1 - 100mm^3_Tumor [R18070562RN01]
GSM5603511 CT26_A1 - 100mm^3_Tumor [R18070563RN01]
GSM5603512 CT26_A1 - 100mm^3_Tumor [R18070564RN01]
Relations
BioProject PRJNA767389
SRA SRP339345

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE185023_RNA-seq.FPKM.tsv.gz 2.4 Mb (ftp)(http) TSV
GSE185023_RNA-seq.raw_count.txt.gz 1.7 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record
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