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Series GSE184485 Query DataSets for GSE184485
Status Public on Sep 20, 2024
Title Phytogenics from sage and lemon verbena promote growth, systemic immunity and disease resistance in Atlantic salmon (Salmo salar)
Organism Salmo salar
Experiment type Expression profiling by array
Summary Deciphering the dietary immunomodulatory effects of a feed additive rich in verbascoside and triterpenic compounds like ursolic (MPLE, NATAC Biotech SL, Spain) on the systemic immune response and disease resistance of Atlantic salmon (Salmo salar L.) smolts.
 
Overall design Transcriptomic analysis was conducted in order to determine the differences on gene expression level between these two dietary strategies at head kidney specific level. The experimental design included two conditions: (1) fish fed basal diet with no phytogenic feed additives (MPLE) (control); (2) fish fed 0.1% inclusion of MPLE (10%, ursolic acid, 3% other triterpenic compounds; 2% verbascoside and <1% polyphenols) from sage and lemon verbena. After 133 days of feeding trial, total RNA were extracted invidually from Atlantic salmon (S. salar) head kidney fed basal diet or an experimental diet containing 0.1% inclusion. Total RNA samples were grouped into 3 pools (n= 6 fish for each condition). The transcriptomic analysis was done following a reference design using the control diet group as reference.
 
Contributor(s) Salomón R, Reyes-López FE, Vallejos-Vidal EC, Gisbert E
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Submission date Sep 20, 2021
Last update date Sep 20, 2024
Contact name Felipe E. Reyes-López
Organization name Universitat Autonoma de Barcelona
Department Cell Biology, Physiology and Immunology
Lab AQUAB-FISH
Street address Animal Physiology Unit, Department of Cell Biology, Physiology and Immunology, Faculty of Biosciences, Universitat Autònoma de Barcelona
City Bellaterra
State/province Barcelona
ZIP/Postal code 08193
Country Spain
 
Platforms (1)
GPL28080 Agilent-084881 Genome-wide Atlantic salmon microarray, first version Salgeno-2
Samples (6)
GSM5589798 Head Kidney_control.1
GSM5589799 Head Kidney_control.2
GSM5589800 Head Kidney_control.3
Relations
BioProject PRJNA764748

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE184485_RAW.tar 14.0 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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