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| Status |
Public on Sep 15, 2021 |
| Title |
The long noncoding RNA H19 regulates tumor plasticity in neuroendocrine prostate cancer [ChIP-seq] |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
To determine the functional epigenetic landscape of changes induced by H19, ChIP-seq was performed on H3K27me3 and H3K4me3 in V16D CRPC cells transduced with H19 (to induce NEtD) versus V16D CRPC control cells. Comaparison of genome-wide maps of chromatin state in V16D CRPC cells with and without H19 overexpression.
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| Overall design |
Examination of 2 different histone modifications, H3K4Me3 and H3K27Me3 in V16D CRPC cells with and without H19 overexpression.
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| |
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| Contributor(s) |
Singh N, Pandey R, Kraft AS |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Sep 12, 2021 |
| Last update date |
Sep 18, 2021 |
| Contact name |
Ritu Pandey |
| Organization name |
University of Arizona
|
| Department |
Cellular and Molecular Medicine, Arizona Cancer Center
|
| Street address |
1515 N Campbell Ave.,
|
| City |
Tucson |
| State/province |
Arizona |
| ZIP/Postal code |
85724 |
| Country |
USA |
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| Platforms (1) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
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| Samples (18)
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| Relations |
| BioProject |
PRJNA762568 |
| SRA |
SRP336740 |
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