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Series GSE183933 Query DataSets for GSE183933
Status Public on Oct 10, 2022
Title Analysis of genes bound by ULK3 and of H3K27 histone modification plus/minus ULK3 silencing in SCC13 cells
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We report high-throughput profiling of genes bound by ULK3 and of H3K27 histone modification plus/minus ULK3 silencing in squamous cell carcinoma SCC13 cells .
 
Overall design Identification of ULK3-bound genes and examination of active chromatin mark ± ULK3 silencing in SCC13 cells
 
Contributor(s) Goruppi S, Clocchiati A, Bottoni G, Ma M, Dotto GP
Citation(s) 36797248
Submission date Sep 10, 2021
Last update date Feb 23, 2023
Contact name Sandro Goruppi
E-mail(s) sgoruppi@mgh.harvard.edu
Phone 6177249537
Organization name MGH-Partners Healthcare
Department CBRC
Street address 13th Street
City Charlestown
State/province Massachusetts
ZIP/Postal code 02129
Country USA
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (6)
GSM5574522 SCC13 cells input DNA
GSM5574523 SCC13 cells ChIP ULK3Ab
GSM5574524 SCC13 shCTR cells input
Relations
BioProject PRJNA762354
SRA SRP336572

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE183933_RAW.tar 919.8 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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