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Series GSE183246 Query DataSets for GSE183246
Status Public on Sep 02, 2021
Title Gene expression profiling of CD45+CD11b+F4/80high macrophages in MC38 tumor of WT mice injected with DMSO or picrotoxin
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We characterized tumor-associated macrophages and found a pro-inflammatory signature of those cells in picrotoxin-treated mice compared to those in control mice (DMSO).
 
Overall design Examination one hundred of tumor-associated macrophages freshly sorted from tumor of WT mice injected with DMSO or picrotoxin on day 7 after tumor inoculation
 
Contributor(s) Zhang B, Faragasan S, Hojo N, Shiroguchi K
Citation(s) 34732892
Submission date Sep 02, 2021
Last update date Nov 19, 2021
Contact name Katsuyuki Shiroguchi
Organization name RIKEN
Department Center for Biosystems Dynamics Research
Lab Laboratory for Prediction of Cell Systems Dynamics
Street address 6-2-3 Furuedai
City Suita
State/province Osaka
ZIP/Postal code 565-0874
Country Japan
 
Platforms (1)
GPL16417 Illumina MiSeq (Mus musculus)
Samples (12)
GSM5553884 Tumor_CD11b+F4/80high [Mp-DMSO_1]
GSM5553885 Tumor_CD11b+F4/80high [Mp-DMSO_2]
GSM5553886 Tumor_CD11b+F4/80high [Mp-DMSO_3]
Relations
BioProject PRJNA759780
SRA SRP335349

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE183246_GeneExpression_Tumor_MP.txt.gz 203.2 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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