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Series GSE182008 Query DataSets for GSE182008
Status Public on Nov 13, 2023
Title CLIP-Seq Analysis Enables the Design of Ribosomal RNA Bait Oligonucleotides That Protect Against C9ORF72 ALS/FTD-Associated Poly-GR Pathophysiology
Organism Homo sapiens
Experiment type Other
Summary We report CLIP-Seq results for GFP tagged poly-GR in order to define poly-GR interacting RNAs in vivo.
 
Overall design Two independent CLIP-Seq experiments were performed for GFP-(GR)50 in HEK-293 cells using GFP, GFP-(GP)10 and untransfected cells as controls.
 
Contributor(s) Boccitto M, Ortega JA, Wolin SL, Kiskinis E
Citation(s) 37948524
Submission date Aug 12, 2021
Last update date Nov 14, 2023
Contact name Evangelos Kiskinis
E-mail(s) evangelos.kiskinis@northwestern.edu
Phone 312-503-6039
Organization name Northwestern University
Department Neurology
Street address 233 E Erie St #500
City Chicago
State/province IL
ZIP/Postal code 60611
Country USA
 
Platforms (1)
GPL15520 Illumina MiSeq (Homo sapiens)
Samples (5)
GSM5516168 GFP
GSM5516169 GFP-(GR)50_1
GSM5516170 untransfected
Relations
BioProject PRJNA754172
SRA SRP332297

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE182008_RAW.tar 110.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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