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| Status |
Public on Oct 13, 2021 |
| Title |
Epigenome analysis of glioblastoma stem-like-cells after long time culturing [Methylation] |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by genome tiling array
|
| Summary |
Genome wide DNA methylation profiling of glioblastoma stem-like-cells was performed to detect changes during long time culturing. The Illumina Infinium MethylationEPIC Kit array was used to obtain DNA methylation profiles across approximately 850,000 CpGs. The samples are seven cell lines containing an early passage (x+0) and an later passage (x+30).
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| Overall design |
Bisulphite converted DNA from the 12 samples were hybridised to the Illumina Infinium Methylation EPIC Kit array
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| |
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| Contributor(s) |
Nickel A, Picard D, Remke M |
| Citation(s) |
34628166 |
| |
| Submission date |
Aug 02, 2021 |
| Last update date |
Oct 14, 2021 |
| Contact name |
Marc Remke |
| E-mail(s) |
marc.remke@med.uni-duesseldorf.de
|
| Organization name |
German Cancer Research Center (DKFZ)
|
| Department |
Pediatric Neuro-Oncogenomics
|
| Street address |
Moorenstr. 5
|
| City |
Düsseldorf |
| State/province |
NRW |
| ZIP/Postal code |
40225 |
| Country |
Germany |
| |
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| Platforms (1) |
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| Samples (14)
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| GSM5494672 |
GBM-1, X+30 |
| GSM5494673 |
JHH520, X+0 |
| GSM5494674 |
JHH520, X+30 |
| GSM5494675 |
NCH644, X+0 |
| GSM5494676 |
NCH644, X+30 |
| GSM5494677 |
BTSC349, X+0 |
| GSM5494678 |
BTSC349, X+30 |
| GSM5494679 |
BTSC233, X+0 |
| GSM5494680 |
BTSC233, X+30 |
| GSM5494681 |
BTSC268, X+0 |
| GSM5494682 |
BTSC268, X+30 |
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| This SubSeries is part of SuperSeries: |
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| Relations |
| BioProject |
PRJNA751562 |
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