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Series GSE180555 Query DataSets for GSE180555
Status Public on Jul 26, 2024
Title Human Somitoids Generated by Reprogramming Pax8+ Urine Cells [ATAC-seq]
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Compared chromatin dynamical changes between UiPSM and CDX2-/- UiPSM using genome-wide ATAC seq
 
Overall design Examination of chromatin dynamical changes in UiPSM and CDX2-/- UiPSM
 
Contributor(s) Huang X
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jul 21, 2021
Last update date Jul 26, 2024
Contact name Xingnan Huang
E-mail(s) huangxingnan1994@gmail.com
Organization name Westlake University
Street address No.18 Shilongshan Road
City Hangzhou
ZIP/Postal code 310024
Country China
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (2)
GSM5464744 CDX2 -/-_ATAC-seq
GSM5464745 WT_ATAC-seq
This SubSeries is part of SuperSeries:
GSE181148 Human Somitoids Generated by Reprogramming Pax8+ Urine Cells
Relations
BioProject PRJNA748692
SRA SRP329282

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE180555_RAW.tar 241.4 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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