NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE180241 Query DataSets for GSE180241
Status Public on Apr 12, 2022
Title Endothelial-immune crosstalk contributes to vascular injury in non-alcoholic fatty liver disease
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Cardiovascular complications are major causes of death in non-alcoholic fatty liver disease (NAFLD) but the underlying endothelial pathophysiology remains understudied. Here, we cultivated blood outgrowth endothelial cells (BOECs) from NAFLD patients and healthy controls. Our transcriptomic analysis revealed that NAFLD BOECs were activated with chemokine hallmarks, in particular, enhanced CXCL12 was confirmed in arterial tissues of mouse NAFLD models. Immunoprofiling by single-cell analysis further uncovered T cell intensification and potentially T-helper type 1 inflammatory reactions in NAFLD. In evaluating CXCL12-CXCR4 axis in chemotaxis, CXCR4 antagonist (AMD3100) substantially modulated the migration of CD4+ T cells, natural killer cells and monocytes towards NAFLD BOECs, which was not observed in healthy control coculture. We found that NAFLD and healthy BOECs might preferentially recruit distinct subsets of immune cells, as a result of unique chemokine ligand-receptor interactions. Finally, we enumerated two folds more circulating endothelial cells, a biomarker of vascular injury, in NAFLD patients than healthy subjects. Our work provides insights for modulation of endothelial-immune crosstalk as an avenue for mitigating endothelial dysfunction in NAFLD.
 
Overall design BOECs were derived from healthy or NAFLD subjects (n = 3 each) and RNA-seq was performed in triplicate each.
 
Contributor(s) Ng C, Cheung C
Citation(s) 35403791
Submission date Jul 16, 2021
Last update date Apr 13, 2022
Contact name Christine Cheung
E-mail(s) ccheung@ntu.edu.sg
Phone +65 6904 7080
Organization name Nanyang Technological University
Department Lee Kong Chian School of Medicine
Street address Nanyang Dr
City Singapore
ZIP/Postal code 636921
Country Singapore
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (6)
GSM5456567 FLAPD_049
GSM5456568 FLAPD_177
GSM5456569 FLAPD_190
Relations
BioProject PRJNA747248
SRA SRP328678

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE180241_RAW.tar 1.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap