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Series GSE180085 Query DataSets for GSE180085
Status Public on Sep 24, 2021
Title Selective Extracellular Signal-Regulated Kinase 1/2 (ERK1/2) Inhibition by the SCH772984 Compound Attenuates In Vitro and In Vivo Inflammatory Responses and Prolongs Survival in Murine Sepsis Models
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary This is an accompanying ATAC-seq data to the transcriptomic survey of RAW264.7 cells treated with ERK1/2 inhibitor SCH772984 upon 1hr, 4hrs and 24 hrs LPS challenge. The transcriptomic data are deposited in GEO under GSE179554.
 
Overall design The experiment was performed on two independent biological replicates per treatment. 16 samples are included.
Web link https://www.mdpi.com/1422-0067/22/19/10204
 
Contributor(s) Kopczyński M, Rumieńczyk I, Kulecka M, Statkiewicz M, Mikula M
Citation(s) 34638546
Submission date Jul 14, 2021
Last update date Oct 26, 2021
Contact name Michał Mikula
E-mail(s) mikula.michal@gmail.com
Phone +48225462655
Organization name Maria Skłodowska-Curie National Research Institute of Oncology
Department Genetics
Street address Roentgena 5
City Warsaw
ZIP/Postal code 02781
Country Poland
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (16)
GSM5452530 DMSO [S2518_Nr36]
GSM5452531 SCH-772984 [S2518_Nr37]
GSM5452532 DMSO LPS 1H [S2518_Nr38]
Relations
BioProject PRJNA746487
SRA SRP328299

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE180085_RAW.tar 17.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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