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Series GSE179797 Query DataSets for GSE179797
Status Public on Sep 12, 2022
Title Reprogramming of naïve B cells in pancreatic cancer subverts humoral immunity
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RNAseq analysis for the differential gene expression pattern between non-tumor bearing and tumor bearing WT and BEBi3-/- mice.
 
Overall design Naïve B cells isolated from spleens non-tumor bearing and tumor bearing WT and BEBi3-/- mice and processed for RNA isolation followed by downstream RNAseq library preparation
 
Contributor(s) Mirlekar B, Zhou M, Kim WY, Pylayeva-Gupta Y
Citation(s) 36099917
Submission date Jul 09, 2021
Last update date Oct 21, 2022
Contact name William Kim
E-mail(s) william_kim@med.unc.edu
Organization name UNC Chapel Hill
Department Lineberger Comprehensive Cancer Center
Street address 450 West Dr
City Chapel Hill
State/province NC
ZIP/Postal code 27599
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (8)
GSM5434318 OT_3
GSM5434319 OT_4
GSM5434320 OT_5
Relations
BioProject PRJNA745092
SRA SRP327629

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE179797_DESeq2_normalized_counts.txt.gz 686.3 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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