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| Status |
Public on Jul 07, 2021 |
| Title |
Distinct signaling pathways distinguish in vivo from in vitro growth in murine ovarian follicle activation and maturation |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
We record the application of RNA sequencing of murine ovarian follicles and mature oocytes during inv itro and in vivo growth.
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| Overall design |
Differential gene expression comparison
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| Contributor(s) |
Amoushahi M, Lykke-Hartmann K |
| Citation(s) |
34368158 |
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| Submission date |
Jul 06, 2021 |
| Last update date |
Aug 11, 2021 |
| Contact name |
Morten T Veno |
| E-mail(s) |
morten.veno@omiics.com
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| Phone |
+45 28727107
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| Organization name |
Omiics ApS
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| Street address |
Aabogade 15
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| City |
Aarhus N |
| State/province |
DK |
| ZIP/Postal code |
8200 |
| Country |
Denmark |
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| Platforms (1) |
| GPL21493 |
Illumina HiSeq 3000 (Mus musculus) |
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| Samples (18)
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| GSM5420165 |
Oocytes from primordial follicles, rep1, in vivo |
| GSM5420166 |
Oocytes from primordial follicles, rep2, in vivo |
| GSM5420167 |
Oocytes from primordial follicles, rep3, in vivo |
| GSM5420168 |
Oocytes from primary follicles, rep1, in vivo |
| GSM5420169 |
Oocytes from primary follicles, rep2, in vivo |
| GSM5420170 |
Oocytes from primary follicles, rep3, in vivo |
| GSM5420171 |
Metaphase oocytes, rep1, in vivo |
| GSM5420172 |
Metaphase oocytes, rep2, in vivo |
| GSM5420173 |
Metaphase oocytes, rep3, in vivo |
| GSM5420174 |
Oocytes from primordial follicles, rep1, In vitro |
| GSM5420175 |
Oocytes from primordial follicles, rep2, In vitro |
| GSM5420176 |
Oocytes from primordial follicles, rep3, In vitro |
| GSM5420177 |
Oocytes from primary follicles, rep1, In vitro |
| GSM5420178 |
Oocytes from primary follicles, rep2, In vitro |
| GSM5420179 |
Oocytes from primary follicles, rep3, In vitro |
| GSM5420180 |
Metaphase oocytes, rep1, In vitro |
| GSM5420181 |
Metaphase oocytes, rep2, In vitro |
| GSM5420182 |
Metaphase oocytes, rep3, In vitro |
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| Relations |
| BioProject |
PRJNA744169 |
| SRA |
SRP327163 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE179538_Raw_gene_counts.txt.gz |
677.3 Kb |
(ftp)(http) |
TXT |
| GSE179538_TPM_normalized_gene_counts.txt.gz |
1.5 Mb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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