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Series GSE179322 Query DataSets for GSE179322
Status Public on Aug 23, 2021
Title Transcriptome analysis of HaCat cells after treatment with siRNA knockdown of Agrin
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary This work describes the alteration in the expression of genes in response to siRNA knockdown of Agrin.
 
Overall design This dataset contains RNA-seq analysis of siRNA control and siRNA Agrin knockdown cells, taken as triplicates.
 
Contributor(s) Chakraborty S, Goy P
Citation(s) 34732729
Submission date Jul 02, 2021
Last update date Nov 22, 2021
Contact name Pierre-alexis Goy
Organization name Genome Institute of Singapore (GIS-ASTAR)
Lab Genome Research Informatics and Data Science Platform
Street address 60 Biopolis Street
City Singapore
State/province Singapore
ZIP/Postal code 138672
Country Singapore
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (6)
GSM5414248 HaCat cells, siRNA control rep 1
GSM5414249 HaCat cells, siRNA control rep 2
GSM5414250 HaCat cells, siRNA control rep 3
Relations
BioProject PRJNA743236
SRA SRP326638

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE179322_cpm_all_genes_all_rep.xlsx 1.3 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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