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Series GSE178469 Query DataSets for GSE178469
Status Public on Jun 19, 2021
Title Pericytes exhibit a parallel pro-fibrotic response after vascular injury in the heart and brain
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Ischemic injury leads to irreversible loss of neurons and cardiomyocytes in the brain and heart, respectively which ultimately results in fibrotic scar formation. Despite recent advances in tissue fibrosis, cellular mediators of scar formation in the heart and brain remain elusive. Pericytes are a heterogeneous population of mural cells that surround microvessels in various organs including the brain and heart. Their function beyond vascular integrity and contractility is poorly understood, although recent studies have suggested they may be a major contributor to tissue fibrosis. In both the heart and brain, differences in injury models, lack of proper transgenic mouse models for lineage tracing and absence of pericyte-specific markers have contributed to discrepancies in the literature regarding their direct contributions to fibrosis. Here, by performing a set of complementary experiments using a common pericyte transgenic model and clinically-relevant ischemic injury models of stroke and myocardial infarction, we demonstrated the parallel pro-fibrotic response of pericyte after vascular injury.
 
Overall design single-cell RNA sequencing analysis of heart and brain of Tbx18CreER/+;Rosa26tdT/+ mice.
 
Contributor(s) Pham T, Park S, Kolluri K, Wang L, Zhao P, Tran D, Kawaguchi R, Carmichael ST, Ardehali R
Citation(s) 34399580, 37183820
Submission date Jun 18, 2021
Last update date Aug 08, 2023
Contact name Reza Ardehali
E-mail(s) RArdehali@mednet.ucla.edu
Phone 310-825-0819
Organization name David Geffen School of Medicine at UCLA
Department Internal Medicine, Division of Cardiology
Lab MacDonald Research Laboratories (MRL) Bldg 3579
Street address 675 Charles E Young Dr S
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (6)
GSM5392187 Tbx18 Sham (Heart)
GSM5392188 Tbx18 MI Infarct
GSM5392189 Tbx18 MI Peri-Infarct
Relations
BioProject PRJNA739169

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE178469_RAW.tar 329.3 Mb (http)(custom) TAR (of MTX, TSV)
Raw data are available in SRA
Processed data provided as supplementary file

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