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Series GSE178097 Query DataSets for GSE178097
Status Public on Jun 15, 2021
Title CUT&Tag analysis of H3K4me3 and H3K27me3 in the neural stem/progenitor cells under crotonate treatment.
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary To gain a deeper insight into how crotonate regulates embryonic neural stem/progenitor cells (NSPCs) proliferation and differentiation, CUT&Tag was performed to analyze the genome-wide changes of H3K4me3 and H3K27me3 stimulated with crotonate in E13.5 NSPCs.
 
Overall design CUT&Tag was performed before and after crotonate treatment, and sequenced on Illumina NovaSeq 6000 platform.
 
Contributor(s) Dai S
Citation(s) 34369651
Submission date Jun 14, 2021
Last update date Aug 10, 2021
Contact name Dai Shang Kun
E-mail(s) daisk@sdut.edu.cn
Organization name Shandong University of Technology
Department School of Life Sciences and Medicine
Lab Laboratory of Developmental and Evolutionary Biology
Street address 266 Xincun West Road
City Zibo
State/province Shandong
ZIP/Postal code 255000
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (6)
GSM5380048 CUT&Tag_Control-H3K4me3
GSM5380049 CUT&Tag_Control-H3K27me3
GSM5380050 CUT&Tag_Control-IgG
Relations
BioProject PRJNA737358
SRA SRP323928

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE178097_RAW.tar 264.9 Mb (http)(custom) TAR (of BW, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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