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| Status |
Public on Oct 12, 2021 |
| Title |
Circadian regulation of SARS-CoV-2 infection in lung epithelial cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Calu-3 cells with stable shBmal1 silencing or SR9009 treatment were performed RNA-seq analysis. The sequence reads were mapped to the human genome.
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| Overall design |
mRNA profiles of control, Bmal1 silenced and SR9009 treated Calu-3 cells
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| Contributor(s) |
Zhuang X, McKeating J |
| Citation(s) |
34545347 |
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| Submission date |
Jun 08, 2021 |
| Last update date |
Oct 13, 2021 |
| Contact name |
Xiaodong Zhuang |
| E-mail(s) |
xiaodong.zhuang@ndm.ox.ac.uk
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| Organization name |
University of Oxford
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| Street address |
Old Road Campus, Roosevelt Drive
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| City |
Oxford |
| State/province |
Oxfordshire |
| ZIP/Postal code |
OX3 7FZ |
| Country |
United Kingdom |
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| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
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| Samples (9)
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| Relations |
| BioProject |
PRJNA736063 |
| SRA |
SRP323246 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE176393_SR9009vsUT.DEG.txt.gz |
4.1 Mb |
(ftp)(http) |
TXT |
| GSE176393_shBmalvsUT.DEG.txt.gz |
4.2 Mb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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