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Series GSE175690 Query DataSets for GSE175690
Status Public on Sep 30, 2023
Title Efficient control of tumor progression by CD4 T cell epitope-based prime-boost therapeutic vaccination
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Other
Summary We reported the differences of transcriptomic landscapes and clonal TCRs in CD4 and CD8 T cells among the control group, vaccination group and naïve group.
 
Overall design Examination of single-cell RNA-seq and single-cell TCR-seq in CD4 and CD8 T cells obtained from naïve and tumor-bearing mice with or without vaccination.
 
Contributor(s) Ye L, Huang J, Cao G, Xie L
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Submission date May 27, 2021
Last update date Oct 02, 2023
Contact name Jun Huang
E-mail(s) huangjun@uchicago.edu
Phone 7737023218
Organization name University of Chicago
Department Institute for Molecular Engineering
Lab Huang Lab
Street address Eckhardt, 5640 S Ellis Ave
City Chicago
State/province IL
ZIP/Postal code 60637
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (6)
GSM5344033 NaïveLN scRNA
GSM5344034 Control scRNA
GSM5344035 Vaccine scRNA
Relations
BioProject PRJNA733193
SRA SRP321667

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE175690_RAW.tar 118.2 Mb (http)(custom) TAR (of CSV, MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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