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GEO accession:
Series GSE175585
Query DataSets for GSE175585
Status
Public on Aug 23, 2021
Title
Bromodomain containing 9 (BRD9) regulates macrophage inflammatory responses and modulates glucocorticoids receptor activity.
Organism
Mus musculus
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Other
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
34446564
Submission date
May 26, 2021
Last update date
Aug 30, 2021
Contact name
Zong Wei
E-mail(s)
Wei.Zong@mayo.edu
Organization name
Mayo Clinic
Lab
WEI LAB
Street address
13400 E Shea Blvd
City
SCOTTSDALE
State/province
Arizona
ZIP/Postal code
85259
Country
USA
Platforms (1)
GPL21103
Illumina HiSeq 4000 (Mus musculus)
Samples (35)
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More...
GSM5342115
ChIPseq_Raw264.7_DexLPS_GR
GSM5342116
ChIPseq_Raw264.7_DexLPS_dBRD9_GR
GSM5342117
CUT&RUN_Raw264.7_DexLPS_BRD9
GSM5342118
CUT&RUN_Raw264.7_dBRD9DexLPS_BRD9
GSM5342119
RNAseq1_BMDM_vehicle_rep1 [ZW_1]
GSM5342120
RNAseq1_BMDM_vehicle_rep2 [ZW_2]
GSM5342121
RNAseq1_BMDM_vehicle_rep3 [ZW_3]
GSM5342122
RNAseq1_BMDM_LPS_rep1 [ZW_4]
GSM5342123
RNAseq1_BMDM_LPS_rep2 [ZW_5]
GSM5342124
RNAseq1_BMDM_LPS_rep3 [ZW_6]
GSM5342125
RNAseq1_BMDM_DexLPS_rep1 [ZW_7]
GSM5342126
RNAseq1_BMDM_DexLPS_rep2 [ZW_8]
GSM5342127
RNAseq1_BMDM_DexLPS_rep3 [ZW_9]
GSM5342128
RNAseq1_BMDM_iBRD9LPS_rep1 [ZW_13]
GSM5342129
RNAseq1_BMDM_iBRD9LPS_rep2 [ZW_14]
GSM5342130
RNAseq1_BMDM_iBRD9LPS_rep3 [ZW_15]
GSM5342131
RNAseq1_BMDM_dBRD9LPS_rep1 [ZW_16]
GSM5342132
RNAseq1_BMDM_dBRD9LPS_rep2 [ZW_17]
GSM5342133
RNAseq1_BMDM_dBRD9LPS_rep3 [ZW_18]
GSM5342134
RNAseq1_BMDM_Dex_iBRD9LPS_rep1 [ZW_22]
GSM5342135
RNAseq1_BMDM_Dex_iBRD9LPS_rep2 [ZW_23]
GSM5342136
RNAseq1_BMDM_Dex_iBRD9LPS_rep3 [ZW_24]
GSM5342137
RNAseq1_BMDM_Dex_dBRD9LPS_rep1 [ZW_25]
GSM5342138
RNAseq1_BMDM_Dex_dBRD9LPS_rep2 [ZW_26]
GSM5342139
RNAseq1_BMDM_Dex_dBRD9LPS_rep3 [ZW_27]
GSM5342140
RNAseq2_BMDM_vehicle_rep1 [Veh_1]
GSM5342141
RNAseq2_BMDM_vehicle_rep2 [Veh_2]
GSM5342142
RNAseq2_BMDM_IFNg_LPS_rep1 [L_g_1]
GSM5342143
RNAseq2_BMDM_IFNg_LPS_rep2 [L_g_2]
GSM5342144
RNAseq2_BMDM_Dex_IFNg_LPS_rep1 [L_g_D_1]
GSM5342145
RNAseq2_BMDM_Dex_IFNg_LPS_rep2 [L_g_D_2]
GSM5342146
RNAseq2_BMDM_dBRD9_IFNg_LPS_rep1 [L_g_d9_1]
GSM5342147
RNAseq2_BMDM_dBRD9_IFNg_LPS_rep2 [L_g_d9_2]
GSM5342148
RNAseq2_BMDM_Dex_dBRD9_IFNg_LPS_rep1 [L_g_D_d1]
GSM5342149
RNAseq2_BMDM_Dex_dBRD9_IFNg_LPS_rep2 [L_g_D_d2]
This SuperSeries is composed of the following SubSeries:
GSE175582
Bromodomain containing 9 (BRD9) regulates macrophage inflammatory responses and modulates glucocorticoids receptor activity [ChIP-seq]
GSE175583
Bromodomain containing 9 (BRD9) regulates macrophage inflammatory responses and modulates glucocorticoids receptor activity [CUT&RUN]
GSE175584
Bromodomain containing 9 (BRD9) regulates macrophage inflammatory responses and modulates glucocorticoids receptor activity [RNA-seq]
Relations
BioProject
PRJNA732934
Download family
Format
SOFT formatted family file(s)
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MINiML formatted family file(s)
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Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE175585_RAW.tar
307.5 Mb
(http)
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TAR (of BW)
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